Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd47Q61735 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.14■□□□□ 0.33
Cd47Q61735 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.14■□□□□ 0.33
Cd47Q61735 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd47Q61735 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd47Q61735 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd47Q61735 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd47Q61735 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Cd47Q61735 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.13■□□□□ 0.33
Cd47Q61735 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd47Q61735 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.12■□□□□ 0.33
Cd47Q61735 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd47Q61735 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.12■□□□□ 0.33
Cd47Q61735 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd47Q61735 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd47Q61735 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd47Q61735 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cd47Q61735 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd47Q61735 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd47Q61735 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.11■□□□□ 0.33
Cd47Q61735 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd47Q61735 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cd47Q61735 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cd47Q61735 Mir7075-201ENSMUST00000184187 82 ntBASIC17.11■□□□□ 0.33
Cd47Q61735 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd47Q61735 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cd47Q61735 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd47Q61735 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd47Q61735 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd47Q61735 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd47Q61735 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Cd47Q61735 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd47Q61735 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd47Q61735 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cd47Q61735 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.09■□□□□ 0.33
Cd47Q61735 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.09■□□□□ 0.33
Cd47Q61735 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd47Q61735 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.09■□□□□ 0.33
Cd47Q61735 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd47Q61735 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd47Q61735 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms