Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd3Q61060 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd3Q61060 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd3Q61060 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd3Q61060 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd3Q61060 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.27■□□□□ 0.36
Foxd3Q61060 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Foxd3Q61060 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd3Q61060 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Foxd3Q61060 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd3Q61060 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.26■□□□□ 0.35
Foxd3Q61060 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Foxd3Q61060 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.26■□□□□ 0.35
Foxd3Q61060 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Foxd3Q61060 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.26■□□□□ 0.35
Foxd3Q61060 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Foxd3Q61060 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd3Q61060 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.26■□□□□ 0.35
Foxd3Q61060 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.25■□□□□ 0.35
Foxd3Q61060 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxd3Q61060 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd3Q61060 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Foxd3Q61060 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd3Q61060 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.23■□□□□ 0.35
Foxd3Q61060 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Gm43173-201ENSMUST00000202246 593 ntBASIC17.23■□□□□ 0.35
Foxd3Q61060 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.23■□□□□ 0.35
Foxd3Q61060 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.23■□□□□ 0.35
Foxd3Q61060 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.23■□□□□ 0.35
Foxd3Q61060 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.23■□□□□ 0.35
Foxd3Q61060 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd3Q61060 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Foxd3Q61060 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Gm26571-201ENSMUST00000181399 666 ntBASIC17.22■□□□□ 0.35
Foxd3Q61060 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxd3Q61060 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxd3Q61060 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Foxd3Q61060 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxd3Q61060 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxd3Q61060 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxd3Q61060 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms