Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Golgb1-201ENSMUST00000023534 498 ntBASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8d-1Q5R1H8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8d-1Q5R1H8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8d-1Q5R1H8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav8d-1Q5R1H8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms