Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1brtQ3UNC9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cks1brtQ3UNC9 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1brtQ3UNC9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1brtQ3UNC9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1brtQ3UNC9 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks1brtQ3UNC9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
Cks1brtQ3UNC9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms