Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc6aQ3UHK8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc6aQ3UHK8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc6aQ3UHK8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc6aQ3UHK8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc6aQ3UHK8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc6aQ3UHK8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc6aQ3UHK8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Gm12896-201ENSMUST00000118430 226 ntBASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc6aQ3UHK8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnrc6aQ3UHK8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnrc6aQ3UHK8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms