Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shc1P98083 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shc1P98083 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shc1P98083 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shc1P98083 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Shc1P98083 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.93■□□□□ 0.3
Shc1P98083 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.93■□□□□ 0.3
Shc1P98083 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shc1P98083 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.93■□□□□ 0.3
Shc1P98083 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shc1P98083 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.92■□□□□ 0.3
Shc1P98083 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.92■□□□□ 0.3
Shc1P98083 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shc1P98083 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Shc1P98083 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.91■□□□□ 0.3
Shc1P98083 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.91■□□□□ 0.3
Shc1P98083 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.91■□□□□ 0.3
Shc1P98083 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Shc1P98083 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shc1P98083 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.9■□□□□ 0.3
Shc1P98083 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Shc1P98083 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Gm13534-201ENSMUST00000121169 513 ntBASIC16.9■□□□□ 0.3
Shc1P98083 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shc1P98083 Gm27405-201ENSMUST00000184201 112 ntBASIC16.9■□□□□ 0.3
Shc1P98083 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.9■□□□□ 0.3
Shc1P98083 Gm7514-201ENSMUST00000209475 934 ntBASIC16.9■□□□□ 0.3
Shc1P98083 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.9■□□□□ 0.3
Shc1P98083 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shc1P98083 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shc1P98083 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shc1P98083 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shc1P98083 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.89■□□□□ 0.29
Shc1P98083 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Shc1P98083 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.89■□□□□ 0.29
Shc1P98083 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
Shc1P98083 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shc1P98083 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shc1P98083 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shc1P98083 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shc1P98083 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.88■□□□□ 0.29
Shc1P98083 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shc1P98083 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shc1P98083 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms