Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx1P63006 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx1P63006 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lhx1P63006 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lhx1P63006 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Lhx1P63006 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.57■□□□□ 0.56
Lhx1P63006 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.57■□□□□ 0.56
Lhx1P63006 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.57■□□□□ 0.56
Lhx1P63006 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lhx1P63006 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx1P63006 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.57■□□□□ 0.56
Lhx1P63006 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx1P63006 Golph3-202ENSMUST00000226517 2359 ntBASIC18.56■□□□□ 0.56
Lhx1P63006 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx1P63006 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx1P63006 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Lhx1P63006 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx1P63006 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.56■□□□□ 0.56
Lhx1P63006 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lhx1P63006 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lhx1P63006 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lhx1P63006 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.55■□□□□ 0.56
Lhx1P63006 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.55■□□□□ 0.56
Lhx1P63006 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.55■□□□□ 0.56
Lhx1P63006 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lhx1P63006 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.54■□□□□ 0.56
Lhx1P63006 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lhx1P63006 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Lhx1P63006 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lhx1P63006 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.54■□□□□ 0.56
Lhx1P63006 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Lhx1P63006 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lhx1P63006 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.53■□□□□ 0.56
Lhx1P63006 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lhx1P63006 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lhx1P63006 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Gm6211-202ENSMUST00000167849 925 ntBASIC18.53■□□□□ 0.56
Lhx1P63006 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lhx1P63006 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.53■□□□□ 0.56
Lhx1P63006 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lhx1P63006 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx1P63006 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.52■□□□□ 0.56
Lhx1P63006 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.52■□□□□ 0.56
Lhx1P63006 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx1P63006 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx1P63006 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx1P63006 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx1P63006 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms