Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SmoP56726 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SmoP56726 Gm7290-201ENSMUST00000104990 617 ntBASIC19.04■□□□□ 0.64
SmoP56726 Gm12918-201ENSMUST00000120234 636 ntBASIC19.04■□□□□ 0.64
SmoP56726 Gm15710-201ENSMUST00000121821 636 ntBASIC19.04■□□□□ 0.64
SmoP56726 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.04■□□□□ 0.64
SmoP56726 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SmoP56726 Gm5075-201ENSMUST00000196916 622 ntBASIC19.04■□□□□ 0.64
SmoP56726 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SmoP56726 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SmoP56726 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.04■□□□□ 0.64
SmoP56726 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.04■□□□□ 0.64
SmoP56726 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SmoP56726 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SmoP56726 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SmoP56726 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SmoP56726 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SmoP56726 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SmoP56726 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SmoP56726 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.02■□□□□ 0.64
SmoP56726 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SmoP56726 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.02■□□□□ 0.64
SmoP56726 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SmoP56726 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SmoP56726 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SmoP56726 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SmoP56726 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SmoP56726 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SmoP56726 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SmoP56726 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SmoP56726 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SmoP56726 Gm13148-201ENSMUST00000118892 745 ntBASIC19.01■□□□□ 0.63
SmoP56726 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.01■□□□□ 0.63
SmoP56726 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.01■□□□□ 0.63
SmoP56726 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.01■□□□□ 0.63
SmoP56726 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.01■□□□□ 0.63
SmoP56726 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SmoP56726 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SmoP56726 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SmoP56726 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19■□□□□ 0.63
SmoP56726 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19■□□□□ 0.63
SmoP56726 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19■□□□□ 0.63
SmoP56726 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SmoP56726 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19■□□□□ 0.63
SmoP56726 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SmoP56726 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SmoP56726 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SmoP56726 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SmoP56726 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SmoP56726 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SmoP56726 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms