Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh4P39038 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdh4P39038 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh4P39038 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh4P39038 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh4P39038 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cdh4P39038 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdh4P39038 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdh4P39038 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh4P39038 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cdh4P39038 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdh4P39038 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh4P39038 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdh4P39038 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cdh4P39038 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh4P39038 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh4P39038 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Cdh4P39038 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.02■□□□□ 0.48
Cdh4P39038 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdh4P39038 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh4P39038 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Cdh4P39038 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh4P39038 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh4P39038 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdh4P39038 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh4P39038 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cdh4P39038 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh4P39038 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh4P39038 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdh4P39038 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdh4P39038 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Cdh4P39038 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh4P39038 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh4P39038 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdh4P39038 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh4P39038 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18■□□□□ 0.47
Cdh4P39038 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Gm27405-201ENSMUST00000184201 112 ntBASIC18■□□□□ 0.47
Cdh4P39038 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18■□□□□ 0.47
Cdh4P39038 Gm7514-201ENSMUST00000209475 934 ntBASIC18■□□□□ 0.47
Cdh4P39038 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Cdh4P39038 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Ap3s1-204ENSMUST00000225520 957 ntBASIC18■□□□□ 0.47
Cdh4P39038 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdh4P39038 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdh4P39038 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18■□□□□ 0.47
Cdh4P39038 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh4P39038 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdh4P39038 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdh4P39038 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdh4P39038 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdh4P39038 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdh4P39038 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh4P39038 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdh4P39038 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Gm7291-201ENSMUST00000199147 382 ntBASIC17.98■□□□□ 0.47
Cdh4P39038 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.98■□□□□ 0.47
Cdh4P39038 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.98■□□□□ 0.47
Cdh4P39038 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.98■□□□□ 0.47
Cdh4P39038 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh4P39038 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.97■□□□□ 0.47
Cdh4P39038 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.97■□□□□ 0.47
Cdh4P39038 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Cdh4P39038 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cdh4P39038 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh4P39038 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh4P39038 Gm13534-201ENSMUST00000121169 513 ntBASIC17.96■□□□□ 0.47
Cdh4P39038 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.96■□□□□ 0.47
Cdh4P39038 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms