Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Gm10849-201ENSMUST00000100397 618 ntBASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1bP25119 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Gm7514-201ENSMUST00000209475 934 ntBASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.46■□□□□ 0.39
Tnfrsf1bP25119 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf1bP25119 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf1bP25119 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Gm27405-201ENSMUST00000184201 112 ntBASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf1bP25119 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Gm13534-201ENSMUST00000121169 513 ntBASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf1bP25119 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf1bP25119 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms