Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.14■□□□□ 0.33
Cbx3P23198 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.14■□□□□ 0.33
Cbx3P23198 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cbx3P23198 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cbx3P23198 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cbx3P23198 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cbx3P23198 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cbx3P23198 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cbx3P23198 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.13■□□□□ 0.33
Cbx3P23198 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.13■□□□□ 0.33
Cbx3P23198 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cbx3P23198 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.13■□□□□ 0.33
Cbx3P23198 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cbx3P23198 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.12■□□□□ 0.33
Cbx3P23198 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cbx3P23198 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cbx3P23198 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cbx3P23198 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cbx3P23198 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.11■□□□□ 0.33
Cbx3P23198 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cbx3P23198 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
Cbx3P23198 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cbx3P23198 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.1■□□□□ 0.33
Cbx3P23198 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.1■□□□□ 0.33
Cbx3P23198 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.1■□□□□ 0.33
Cbx3P23198 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cbx3P23198 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Cbx3P23198 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.09■□□□□ 0.33
Cbx3P23198 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.09■□□□□ 0.33
Cbx3P23198 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cbx3P23198 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cbx3P23198 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.09■□□□□ 0.33
Cbx3P23198 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms