Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ChrneP20782 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
ChrneP20782 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ChrneP20782 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.8■□□□□ 0.44
ChrneP20782 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
ChrneP20782 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.79■□□□□ 0.44
ChrneP20782 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.79■□□□□ 0.44
ChrneP20782 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ChrneP20782 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ChrneP20782 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ChrneP20782 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Gm7291-201ENSMUST00000199147 382 ntBASIC17.78■□□□□ 0.44
ChrneP20782 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.78■□□□□ 0.44
ChrneP20782 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.78■□□□□ 0.44
ChrneP20782 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ChrneP20782 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ChrneP20782 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ChrneP20782 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ChrneP20782 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChrneP20782 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ChrneP20782 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChrneP20782 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChrneP20782 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ChrneP20782 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.77■□□□□ 0.44
ChrneP20782 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.77■□□□□ 0.44
ChrneP20782 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.77■□□□□ 0.44
ChrneP20782 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ChrneP20782 Reep4-203ENSMUST00000226563 1444 ntBASIC17.77■□□□□ 0.44
ChrneP20782 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ChrneP20782 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ChrneP20782 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ChrneP20782 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Gm26571-201ENSMUST00000181399 666 ntBASIC17.76■□□□□ 0.43
ChrneP20782 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.76■□□□□ 0.43
ChrneP20782 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChrneP20782 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ChrneP20782 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.75■□□□□ 0.43
ChrneP20782 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.75■□□□□ 0.43
ChrneP20782 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChrneP20782 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ChrneP20782 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ChrneP20782 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ChrneP20782 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
ChrneP20782 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ChrneP20782 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ChrneP20782 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.74■□□□□ 0.43
ChrneP20782 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.74■□□□□ 0.43
ChrneP20782 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChrneP20782 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ChrneP20782 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ChrneP20782 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms