Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RaraP11416 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
RaraP11416 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.43■□□□□ 0.86
RaraP11416 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.43■□□□□ 0.86
RaraP11416 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RaraP11416 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RaraP11416 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RaraP11416 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.43■□□□□ 0.86
RaraP11416 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RaraP11416 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
RaraP11416 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RaraP11416 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Gm43173-201ENSMUST00000202246 593 ntBASIC20.42■□□□□ 0.86
RaraP11416 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RaraP11416 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RaraP11416 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.41■□□□□ 0.86
RaraP11416 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.41■□□□□ 0.86
RaraP11416 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RaraP11416 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.41■□□□□ 0.86
RaraP11416 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RaraP11416 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RaraP11416 Gm11421-201ENSMUST00000122124 294 ntBASIC20.4■□□□□ 0.86
RaraP11416 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RaraP11416 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RaraP11416 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.4■□□□□ 0.86
RaraP11416 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RaraP11416 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RaraP11416 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RaraP11416 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RaraP11416 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RaraP11416 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
RaraP11416 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.39■□□□□ 0.86
RaraP11416 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.39■□□□□ 0.86
RaraP11416 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RaraP11416 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.39■□□□□ 0.85
RaraP11416 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RaraP11416 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RaraP11416 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.38■□□□□ 0.85
RaraP11416 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Gm7860-201ENSMUST00000121190 879 ntBASIC20.38■□□□□ 0.85
RaraP11416 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RaraP11416 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RaraP11416 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RaraP11416 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.38■□□□□ 0.85
RaraP11416 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RaraP11416 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RaraP11416 Gm8493-201ENSMUST00000196881 489 ntBASIC20.37■□□□□ 0.85
RaraP11416 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RaraP11416 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RaraP11416 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RaraP11416 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.36■□□□□ 0.85
RaraP11416 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.36■□□□□ 0.85
RaraP11416 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms