Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxc6P10629 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxc6P10629 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Hoxc6P10629 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hoxc6P10629 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Hoxc6P10629 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Hoxc6P10629 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Hoxc6P10629 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxc6P10629 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxc6P10629 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Hoxc6P10629 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Hoxc6P10629 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxc6P10629 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Hoxc6P10629 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.07■□□□□ 0.96
Hoxc6P10629 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.07■□□□□ 0.96
Hoxc6P10629 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Hoxc6P10629 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc6P10629 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hoxc6P10629 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hoxc6P10629 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxc6P10629 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.06■□□□□ 0.96
Hoxc6P10629 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxc6P10629 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxc6P10629 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.05■□□□□ 0.96
Hoxc6P10629 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hoxc6P10629 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Hoxc6P10629 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.05■□□□□ 0.96
Hoxc6P10629 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxc6P10629 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxc6P10629 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.05■□□□□ 0.96
Hoxc6P10629 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.04■□□□□ 0.96
Hoxc6P10629 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Hoxc6P10629 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.04■□□□□ 0.96
Hoxc6P10629 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hoxc6P10629 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc6P10629 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.03■□□□□ 0.96
Hoxc6P10629 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.03■□□□□ 0.96
Hoxc6P10629 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Hoxc6P10629 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.03■□□□□ 0.96
Hoxc6P10629 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc6P10629 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc6P10629 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc6P10629 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Hoxc6P10629 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc6P10629 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxc6P10629 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hoxc6P10629 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc6P10629 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hoxc6P10629 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Gm2399-201ENSMUST00000104944 225 ntBASIC21.01■□□□□ 0.95
Hoxc6P10629 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Gm15378-201ENSMUST00000121894 207 ntBASIC21.01■□□□□ 0.95
Hoxc6P10629 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.01■□□□□ 0.95
Hoxc6P10629 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc6P10629 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hoxc6P10629 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms