Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P01808 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.13■□□□□ 0.33
P01808 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
P01808 Gm18671-201ENSMUST00000214826 683 ntBASIC17.13■□□□□ 0.33
P01808 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01808 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01808 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01808 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01808 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.12■□□□□ 0.33
P01808 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01808 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.12■□□□□ 0.33
P01808 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.12■□□□□ 0.33
P01808 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
P01808 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01808 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01808 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01808 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01808 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
P01808 Gm13534-201ENSMUST00000121169 513 ntBASIC17.11■□□□□ 0.33
P01808 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.11■□□□□ 0.33
P01808 Gm26571-201ENSMUST00000181399 666 ntBASIC17.11■□□□□ 0.33
P01808 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.11■□□□□ 0.33
P01808 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01808 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01808 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.1■□□□□ 0.33
P01808 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
P01808 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P01808 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
P01808 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
P01808 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01808 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.09■□□□□ 0.33
P01808 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.09■□□□□ 0.33
P01808 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.09■□□□□ 0.33
P01808 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P01808 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01808 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P01808 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01808 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01808 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P01808 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
P01808 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 AV356131-201ENSMUST00000206201 750 ntBASIC17.08■□□□□ 0.32
P01808 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01808 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P01808 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.07■□□□□ 0.32
P01808 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.07■□□□□ 0.32
P01808 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.07■□□□□ 0.32
P01808 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.07■□□□□ 0.32
P01808 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01808 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01808 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01808 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01808 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01808 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01808 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P01808 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P01808 Gm10849-201ENSMUST00000100397 618 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms