Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01804 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P01804 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P01804 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
P01804 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.29■□□□□ 0.2
P01804 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
P01804 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.29■□□□□ 0.2
P01804 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.29■□□□□ 0.2
P01804 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
P01804 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
P01804 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01804 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.28■□□□□ 0.2
P01804 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.28■□□□□ 0.2
P01804 Gm13146-201ENSMUST00000118508 780 ntBASIC16.28■□□□□ 0.2
P01804 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.28■□□□□ 0.2
P01804 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.28■□□□□ 0.2
P01804 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01804 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P01804 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
P01804 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.27■□□□□ 0.2
P01804 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01804 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
P01804 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
P01804 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01804 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
P01804 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
P01804 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
P01804 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01804 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
P01804 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P01804 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P01804 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P01804 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Gm26571-201ENSMUST00000181399 666 ntBASIC16.25■□□□□ 0.19
P01804 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.25■□□□□ 0.19
P01804 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P01804 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.25■□□□□ 0.19
P01804 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01804 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01804 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01804 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
P01804 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01804 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
P01804 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01804 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01804 Gm7514-201ENSMUST00000209475 934 ntBASIC16.24■□□□□ 0.19
P01804 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms