Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Becn1O88597 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Becn1O88597 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.57■■□□□ 1.04
Becn1O88597 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Becn1O88597 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Becn1O88597 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.56■■□□□ 1.04
Becn1O88597 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.56■■□□□ 1.04
Becn1O88597 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Becn1O88597 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Becn1O88597 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.55■■□□□ 1.04
Becn1O88597 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Becn1O88597 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Becn1O88597 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.54■■□□□ 1.04
Becn1O88597 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.54■■□□□ 1.04
Becn1O88597 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.54■■□□□ 1.04
Becn1O88597 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Becn1O88597 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.54■■□□□ 1.04
Becn1O88597 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Becn1O88597 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.54■■□□□ 1.04
Becn1O88597 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Becn1O88597 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.53■■□□□ 1.04
Becn1O88597 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.53■■□□□ 1.04
Becn1O88597 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.53■■□□□ 1.04
Becn1O88597 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.53■■□□□ 1.04
Becn1O88597 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Becn1O88597 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Becn1O88597 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Becn1O88597 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Becn1O88597 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Becn1O88597 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Becn1O88597 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Becn1O88597 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Becn1O88597 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Becn1O88597 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Becn1O88597 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Becn1O88597 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.5■■□□□ 1.03
Becn1O88597 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Becn1O88597 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.5■■□□□ 1.03
Becn1O88597 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Becn1O88597 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.5■■□□□ 1.03
Becn1O88597 Fst-202ENSMUST00000223640 2612 ntBASIC21.5■■□□□ 1.03
Becn1O88597 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms