Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ttc3O88196 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ttc3O88196 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc3O88196 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.96■□□□□ 0.79
Ttc3O88196 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ttc3O88196 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc3O88196 Gm8520-201ENSMUST00000186517 868 ntBASIC19.96■□□□□ 0.79
Ttc3O88196 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Ttc3O88196 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc3O88196 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ttc3O88196 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Ttc3O88196 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ttc3O88196 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ttc3O88196 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Dio3-201ENSMUST00000097228 1449 ntBASIC19.95■□□□□ 0.78
Ttc3O88196 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ttc3O88196 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ttc3O88196 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ttc3O88196 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.94■□□□□ 0.78
Ttc3O88196 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ttc3O88196 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ttc3O88196 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc3O88196 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.93■□□□□ 0.78
Ttc3O88196 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.93■□□□□ 0.78
Ttc3O88196 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.93■□□□□ 0.78
Ttc3O88196 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc3O88196 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ttc3O88196 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc3O88196 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc3O88196 Gm27275-201ENSMUST00000184318 272 ntBASIC19.92■□□□□ 0.78
Ttc3O88196 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.92■□□□□ 0.78
Ttc3O88196 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.92■□□□□ 0.78
Ttc3O88196 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.92■□□□□ 0.78
Ttc3O88196 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
Ttc3O88196 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc3O88196 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc3O88196 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ttc3O88196 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.92■□□□□ 0.78
Ttc3O88196 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.92■□□□□ 0.78
Ttc3O88196 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Ttc3O88196 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.91■□□□□ 0.78
Ttc3O88196 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.91■□□□□ 0.78
Ttc3O88196 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ttc3O88196 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ttc3O88196 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ttc3O88196 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.9■□□□□ 0.78
Ttc3O88196 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ttc3O88196 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ttc3O88196 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ttc3O88196 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.9■□□□□ 0.78
Ttc3O88196 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.9■□□□□ 0.78
Ttc3O88196 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ttc3O88196 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ttc3O88196 Gm5643-201ENSMUST00000117081 966 ntBASIC19.89■□□□□ 0.77
Ttc3O88196 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ttc3O88196 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ttc3O88196 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ttc3O88196 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms