Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrnO55106 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
StrnO55106 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
StrnO55106 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrnO55106 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
StrnO55106 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
StrnO55106 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
StrnO55106 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
StrnO55106 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.82■□□□□ 0.92
StrnO55106 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.82■□□□□ 0.92
StrnO55106 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.82■□□□□ 0.92
StrnO55106 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.82■□□□□ 0.92
StrnO55106 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
StrnO55106 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrnO55106 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
StrnO55106 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.81■□□□□ 0.92
StrnO55106 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Gm5643-201ENSMUST00000117081 966 ntBASIC20.81■□□□□ 0.92
StrnO55106 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.81■□□□□ 0.92
StrnO55106 Gm27275-201ENSMUST00000184318 272 ntBASIC20.81■□□□□ 0.92
StrnO55106 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.81■□□□□ 0.92
StrnO55106 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
StrnO55106 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
StrnO55106 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
StrnO55106 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
StrnO55106 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.8■□□□□ 0.92
StrnO55106 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
StrnO55106 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrnO55106 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
StrnO55106 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
StrnO55106 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrnO55106 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.79■□□□□ 0.92
StrnO55106 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.78■□□□□ 0.92
StrnO55106 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
StrnO55106 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.78■□□□□ 0.92
StrnO55106 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Dio3-201ENSMUST00000097228 1449 ntBASIC20.78■□□□□ 0.92
StrnO55106 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrnO55106 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
StrnO55106 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.77■□□□□ 0.92
StrnO55106 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.77■□□□□ 0.92
StrnO55106 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
StrnO55106 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
StrnO55106 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.77■□□□□ 0.92
StrnO55106 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
StrnO55106 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
StrnO55106 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.77■□□□□ 0.91
StrnO55106 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrnO55106 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrnO55106 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.76■□□□□ 0.91
StrnO55106 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrnO55106 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrnO55106 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrnO55106 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
StrnO55106 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
StrnO55106 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.75■□□□□ 0.91
StrnO55106 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
StrnO55106 Mir7071-201ENSMUST00000184847 69 ntBASIC20.75■□□□□ 0.91
StrnO55106 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.75■□□□□ 0.91
StrnO55106 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
StrnO55106 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrnO55106 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms