Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.68■□□□□ 0.42
Cx3cl1O35188 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.68■□□□□ 0.42
Cx3cl1O35188 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cl1O35188 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cl1O35188 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.66■□□□□ 0.42
Cx3cl1O35188 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cx3cl1O35188 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cx3cl1O35188 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cx3cl1O35188 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cx3cl1O35188 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Cx3cl1O35188 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cx3cl1O35188 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cx3cl1O35188 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cx3cl1O35188 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.62■□□□□ 0.41
Cx3cl1O35188 Gm27405-201ENSMUST00000184201 112 ntBASIC17.62■□□□□ 0.41
Cx3cl1O35188 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cx3cl1O35188 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.61■□□□□ 0.41
Cx3cl1O35188 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cx3cl1O35188 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.61■□□□□ 0.41
Cx3cl1O35188 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms