Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-3J3QMG8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13d-3J3QMG8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Reep4-203ENSMUST00000226563 1444 ntBASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-3J3QMG8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-3J3QMG8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav13d-3J3QMG8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav13d-3J3QMG8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav13d-3J3QMG8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-3J3QMG8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-3J3QMG8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms