Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.86■□□□□ 0.61
Gm3139J3QK78 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.86■□□□□ 0.61
Gm3139J3QK78 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.86■□□□□ 0.61
Gm3139J3QK78 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm3139J3QK78 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3139J3QK78 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3139J3QK78 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.84■□□□□ 0.61
Gm3139J3QK78 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3139J3QK78 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3139J3QK78 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3139J3QK78 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.81■□□□□ 0.6
Gm3139J3QK78 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3139J3QK78 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm3139J3QK78 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3139J3QK78 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.79■□□□□ 0.6
Gm3139J3QK78 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms