Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.41□□□□□ -0.1
Col6a5A6H584 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Gm7860-201ENSMUST00000121190 879 ntBASIC14.41□□□□□ -0.1
Col6a5A6H584 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.4□□□□□ -0.1
Col6a5A6H584 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a5A6H584 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a5A6H584 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a5A6H584 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a5A6H584 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.4□□□□□ -0.1
Col6a5A6H584 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a5A6H584 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.4□□□□□ -0.1
Col6a5A6H584 Gm43514-201ENSMUST00000198852 424 ntBASIC14.39□□□□□ -0.11
Col6a5A6H584 Gm18959-201ENSMUST00000208954 655 ntBASIC14.39□□□□□ -0.11
Col6a5A6H584 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a5A6H584 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a5A6H584 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.39□□□□□ -0.11
Col6a5A6H584 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.39□□□□□ -0.11
Col6a5A6H584 Gm18025-201ENSMUST00000221733 862 ntBASIC14.39□□□□□ -0.11
Col6a5A6H584 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Gm12382-201ENSMUST00000122005 922 ntBASIC14.38□□□□□ -0.11
Col6a5A6H584 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.38□□□□□ -0.11
Col6a5A6H584 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.38□□□□□ -0.11
Col6a5A6H584 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a5A6H584 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col6a5A6H584 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col6a5A6H584 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a5A6H584 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.37□□□□□ -0.11
Col6a5A6H584 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.37□□□□□ -0.11
Col6a5A6H584 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.37□□□□□ -0.11
Col6a5A6H584 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a5A6H584 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Col6a5A6H584 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a5A6H584 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.36□□□□□ -0.11
Col6a5A6H584 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Col6a5A6H584 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Gm25016-201ENSMUST00000158399 131 ntBASIC14.36□□□□□ -0.11
Col6a5A6H584 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a5A6H584 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Col6a5A6H584 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a5A6H584 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Gm17661-201ENSMUST00000170317 270 ntBASIC14.35□□□□□ -0.11
Col6a5A6H584 Gm45058-201ENSMUST00000205810 766 ntBASIC14.35□□□□□ -0.11
Col6a5A6H584 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col6a5A6H584 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a5A6H584 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a5A6H584 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Col6a5A6H584 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms