Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav13n-4A0A0G2JG01 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-4A0A0G2JG01 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-4A0A0G2JG01 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm37179-201ENSMUST00000194862 823 ntBASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-4A0A0G2JG01 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm10849-201ENSMUST00000100397 618 ntBASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-4A0A0G2JG01 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 AV356131-201ENSMUST00000206201 750 ntBASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-4A0A0G2JG01 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-4A0A0G2JG01 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms