Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.24■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V3A0A0G2JEW2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms