Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-4A0A075B654 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-4A0A075B654 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-4A0A075B654 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav3-4A0A075B654 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-4A0A075B654 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-4A0A075B654 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms