Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 Golph3-205ENSMUST00000228671 2842 ntBASIC15.72■□□□□ 0.11
Trav5-4A0A075B652 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-4A0A075B652 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-4A0A075B652 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Gm12821-201ENSMUST00000120022 600 ntBASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-4A0A075B652 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav5-4A0A075B652 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Gm8493-201ENSMUST00000196881 489 ntBASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms