Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chaf1aQ9QWF0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Gm43137-201ENSMUST00000198052 594 ntBASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1aQ9QWF0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.11■□□□□ 0.97
Chaf1aQ9QWF0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Gm12251-201ENSMUST00000117893 792 ntBASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1aQ9QWF0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Gm21956-201ENSMUST00000179946 522 ntBASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1aQ9QWF0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chaf1aQ9QWF0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chaf1aQ9QWF0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chaf1aQ9QWF0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1aQ9QWF0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1aQ9QWF0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms