Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.3■□□□□ 0.36
Prg4Q9JM99 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prg4Q9JM99 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gm10602-201ENSMUST00000098239 609 ntBASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prg4Q9JM99 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.28■□□□□ 0.36
Prg4Q9JM99 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.28■□□□□ 0.36
Prg4Q9JM99 Gm6365-201ENSMUST00000054711 744 ntBASIC17.28■□□□□ 0.36
Prg4Q9JM99 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.28■□□□□ 0.36
Prg4Q9JM99 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prg4Q9JM99 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.27■□□□□ 0.36
Prg4Q9JM99 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.27■□□□□ 0.36
Prg4Q9JM99 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prg4Q9JM99 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Prg4Q9JM99 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Prg4Q9JM99 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Prg4Q9JM99 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Gm6211-202ENSMUST00000167849 925 ntBASIC17.26■□□□□ 0.35
Prg4Q9JM99 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.26■□□□□ 0.35
Prg4Q9JM99 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prg4Q9JM99 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prg4Q9JM99 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prg4Q9JM99 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prg4Q9JM99 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prg4Q9JM99 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms