Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 AC011767.1-201ENST00000617410 1153 ntBASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
ATXN3LQ9H3M9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ATXN3LQ9H3M9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATXN3LQ9H3M9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.53■■□□□ 1.2
ATXN3LQ9H3M9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 C1orf229-201ENST00000623686 2258 ntBASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 AP004607.7-201ENST00000527152 1677 ntBASIC22.52■■□□□ 1.2
ATXN3LQ9H3M9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 AC006970.2-201ENST00000450065 779 ntBASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ATXN3LQ9H3M9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
ATXN3LQ9H3M9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.5■■□□□ 1.19
ATXN3LQ9H3M9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.5■■□□□ 1.19
ATXN3LQ9H3M9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ATXN3LQ9H3M9 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
ATXN3LQ9H3M9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 OR7E47P-201ENST00000546390 1422 ntBASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 CROCCP5-201ENST00000436658 830 ntBASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.49■■□□□ 1.19
ATXN3LQ9H3M9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms