Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim39Q9ESN2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim39Q9ESN2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim39Q9ESN2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim39Q9ESN2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim39Q9ESN2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim39Q9ESN2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Gm12821-201ENSMUST00000120022 600 ntBASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim39Q9ESN2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim39Q9ESN2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim39Q9ESN2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim39Q9ESN2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim39Q9ESN2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim39Q9ESN2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Spcs1-204ENSMUST00000226782 949 ntBASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim39Q9ESN2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim39Q9ESN2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Trim39Q9ESN2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms