Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rita1Q9D1H0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rita1Q9D1H0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Rita1Q9D1H0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rita1Q9D1H0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rita1Q9D1H0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rita1Q9D1H0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rita1Q9D1H0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rita1Q9D1H0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.47■□□□□ 0.39
Rita1Q9D1H0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rita1Q9D1H0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rita1Q9D1H0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.45■□□□□ 0.38
Rita1Q9D1H0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rita1Q9D1H0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rita1Q9D1H0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rita1Q9D1H0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rita1Q9D1H0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms