Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.37
Ift27Q9D0P8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift27Q9D0P8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Gm43530-201ENSMUST00000195920 274 ntBASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift27Q9D0P8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift27Q9D0P8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.31■□□□□ 0.36
Ift27Q9D0P8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift27Q9D0P8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift27Q9D0P8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift27Q9D0P8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ift27Q9D0P8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ift27Q9D0P8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ift27Q9D0P8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms