Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Lsm7Q9CQQ8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.16■□□□□ 0.66
Lsm7Q9CQQ8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm7Q9CQQ8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm7Q9CQQ8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.14■□□□□ 0.65
Lsm7Q9CQQ8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm7Q9CQQ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm7Q9CQQ8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm7Q9CQQ8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lsm7Q9CQQ8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm7Q9CQQ8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm7Q9CQQ8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm7Q9CQQ8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm7Q9CQQ8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms