Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Rpl39lQ9CQD0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl39lQ9CQD0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39lQ9CQD0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39lQ9CQD0 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39lQ9CQD0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39lQ9CQD0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms