Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx6-1Q99MA9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-1Q99MA9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-1Q99MA9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx6-1Q99MA9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx6-1Q99MA9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx6-1Q99MA9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx6-1Q99MA9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-1Q99MA9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms