Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.85■□□□□ 0.61
Homer3Q99JP6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.85■□□□□ 0.61
Homer3Q99JP6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Homer3Q99JP6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Homer3Q99JP6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Homer3Q99JP6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Homer3Q99JP6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.85■□□□□ 0.61
Homer3Q99JP6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Homer3Q99JP6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Homer3Q99JP6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Homer3Q99JP6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Homer3Q99JP6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.83■□□□□ 0.61
Homer3Q99JP6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Homer3Q99JP6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.83■□□□□ 0.6
Homer3Q99JP6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.83■□□□□ 0.6
Homer3Q99JP6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.83■□□□□ 0.6
Homer3Q99JP6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Homer3Q99JP6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Homer3Q99JP6 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.82■□□□□ 0.6
Homer3Q99JP6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Homer3Q99JP6 Gm9959-201ENSMUST00000068277 390 ntBASIC18.82■□□□□ 0.6
Homer3Q99JP6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.82■□□□□ 0.6
Homer3Q99JP6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Homer3Q99JP6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Homer3Q99JP6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Homer3Q99JP6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Homer3Q99JP6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Homer3Q99JP6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.79■□□□□ 0.6
Homer3Q99JP6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.79■□□□□ 0.6
Homer3Q99JP6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Grk6-206ENSMUST00000224995 2971 ntBASIC18.78■□□□□ 0.6
Homer3Q99JP6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.78■□□□□ 0.6
Homer3Q99JP6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Homer3Q99JP6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms