Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga11Q91XY8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Smad6-203ENSMUST00000179458 273 ntBASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga11Q91XY8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhga11Q91XY8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga11Q91XY8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhga11Q91XY8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga11Q91XY8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga11Q91XY8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga11Q91XY8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms