Protein–RNA interactions for Protein: Q91WA3

Hdac11, Histone deacetylase 11, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac11Q91WA3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac11Q91WA3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac11Q91WA3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac11Q91WA3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hdac11Q91WA3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac11Q91WA3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.77■□□□□ 0.6
Hdac11Q91WA3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac11Q91WA3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac11Q91WA3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac11Q91WA3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Hdac11Q91WA3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac11Q91WA3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac11Q91WA3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms