Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TraipQ8VIG6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.23■□□□□ 0.83
TraipQ8VIG6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.22■□□□□ 0.83
TraipQ8VIG6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TraipQ8VIG6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Gm10653-202ENSMUST00000139570 835 ntBASIC20.21■□□□□ 0.83
TraipQ8VIG6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TraipQ8VIG6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.2■□□□□ 0.82
TraipQ8VIG6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TraipQ8VIG6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TraipQ8VIG6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TraipQ8VIG6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.18■□□□□ 0.82
TraipQ8VIG6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TraipQ8VIG6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.17■□□□□ 0.82
TraipQ8VIG6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.17■□□□□ 0.82
TraipQ8VIG6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TraipQ8VIG6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TraipQ8VIG6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms