Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40cQ8VHQ4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rab40cQ8VHQ4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Gm5812-201ENSMUST00000061073 957 ntBASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rab40cQ8VHQ4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Rarb-207ENSMUST00000225921 2756 ntBASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rab40cQ8VHQ4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rab40cQ8VHQ4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40cQ8VHQ4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40cQ8VHQ4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rab40cQ8VHQ4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Gm15820-201ENSMUST00000201566 728 ntBASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rab40cQ8VHQ4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms