Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lmcd1Q8VEE1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Lmcd1Q8VEE1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lmcd1Q8VEE1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Gm6659-201ENSMUST00000174752 547 ntBASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lmcd1Q8VEE1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lmcd1Q8VEE1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lmcd1Q8VEE1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lmcd1Q8VEE1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.27■□□□□ 0.83
Lmcd1Q8VEE1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Lmcd1Q8VEE1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lmcd1Q8VEE1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lmcd1Q8VEE1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lmcd1Q8VEE1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lmcd1Q8VEE1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lmcd1Q8VEE1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lmcd1Q8VEE1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lmcd1Q8VEE1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Gm10517-202ENSMUST00000192970 758 ntBASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Gm21814-202ENSMUST00000203277 873 ntBASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lmcd1Q8VEE1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms