Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Gm13146-201ENSMUST00000118508 780 ntBASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ndc1Q8VCB1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ndc1Q8VCB1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndc1Q8VCB1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.84■□□□□ 0.45
Ndc1Q8VCB1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ndc1Q8VCB1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ndc1Q8VCB1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.83■□□□□ 0.45
Ndc1Q8VCB1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ndc1Q8VCB1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ndc1Q8VCB1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc1Q8VCB1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc1Q8VCB1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ndc1Q8VCB1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms