Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slf1Q8R3P9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slf1Q8R3P9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slf1Q8R3P9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slf1Q8R3P9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slf1Q8R3P9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slf1Q8R3P9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slf1Q8R3P9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Rps24-207ENSMUST00000224568 714 ntBASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slf1Q8R3P9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms