Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Defb35Q8R2I3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Defb35Q8R2I3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Defb35Q8R2I3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.18■□□□□ 0.5
Defb35Q8R2I3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Defb35Q8R2I3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb35Q8R2I3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb35Q8R2I3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb35Q8R2I3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Defb35Q8R2I3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Defb35Q8R2I3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
Defb35Q8R2I3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Defb35Q8R2I3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb35Q8R2I3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Defb35Q8R2I3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Defb35Q8R2I3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms