Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CipcQ8R0W1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.87■□□□□ 0.45
CipcQ8R0W1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CipcQ8R0W1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CipcQ8R0W1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.86■□□□□ 0.45
CipcQ8R0W1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CipcQ8R0W1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Gm10849-201ENSMUST00000100397 618 ntBASIC17.85■□□□□ 0.45
CipcQ8R0W1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CipcQ8R0W1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CipcQ8R0W1 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.84■□□□□ 0.45
CipcQ8R0W1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CipcQ8R0W1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.83■□□□□ 0.45
CipcQ8R0W1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CipcQ8R0W1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CipcQ8R0W1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.82■□□□□ 0.44
CipcQ8R0W1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CipcQ8R0W1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.81■□□□□ 0.44
CipcQ8R0W1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Gm38205-201ENSMUST00000192243 258 ntBASIC17.81■□□□□ 0.44
CipcQ8R0W1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CipcQ8R0W1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms