Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Gm42778-201ENSMUST00000199644 553 ntBASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn1Q8K0T0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn1Q8K0T0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn1Q8K0T0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn1Q8K0T0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Gm13146-201ENSMUST00000118508 780 ntBASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn1Q8K0T0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn1Q8K0T0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Gm10033-202ENSMUST00000211874 928 ntBASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Rtn1Q8K0T0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Gm42642-201ENSMUST00000200683 355 ntBASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn1Q8K0T0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rtn1Q8K0T0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms