Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcll1Q8JZS7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Hmgcll1Q8JZS7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgcll1Q8JZS7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hmgcll1Q8JZS7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgcll1Q8JZS7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgcll1Q8JZS7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgcll1Q8JZS7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgcll1Q8JZS7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgcll1Q8JZS7 Gm6211-202ENSMUST00000167849 925 ntBASIC19.58■□□□□ 0.72
Hmgcll1Q8JZS7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.58■□□□□ 0.72
Hmgcll1Q8JZS7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgcll1Q8JZS7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Hmgcll1Q8JZS7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgcll1Q8JZS7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgcll1Q8JZS7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Gm4968-201ENSMUST00000071458 858 ntBASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgcll1Q8JZS7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgcll1Q8JZS7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgcll1Q8JZS7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms