Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Eri3Q8C460 Gm38205-201ENSMUST00000192243 258 ntBASIC18.02■□□□□ 0.48
Eri3Q8C460 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.02■□□□□ 0.48
Eri3Q8C460 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Eri3Q8C460 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Eri3Q8C460 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Eri3Q8C460 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Eri3Q8C460 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Eri3Q8C460 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Eri3Q8C460 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Eri3Q8C460 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.02■□□□□ 0.47
Eri3Q8C460 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Reep4-203ENSMUST00000226563 1444 ntBASIC18.01■□□□□ 0.47
Eri3Q8C460 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.01■□□□□ 0.47
Eri3Q8C460 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.01■□□□□ 0.47
Eri3Q8C460 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.01■□□□□ 0.47
Eri3Q8C460 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.01■□□□□ 0.47
Eri3Q8C460 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.01■□□□□ 0.47
Eri3Q8C460 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.01■□□□□ 0.47
Eri3Q8C460 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Eri3Q8C460 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Eri3Q8C460 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Eri3Q8C460 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Eri3Q8C460 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Eri3Q8C460 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18■□□□□ 0.47
Eri3Q8C460 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Eri3Q8C460 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18■□□□□ 0.47
Eri3Q8C460 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Eri3Q8C460 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Eri3Q8C460 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Eri3Q8C460 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.99■□□□□ 0.47
Eri3Q8C460 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.99■□□□□ 0.47
Eri3Q8C460 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Eri3Q8C460 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Eri3Q8C460 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Gm42778-201ENSMUST00000199644 553 ntBASIC17.98■□□□□ 0.47
Eri3Q8C460 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Eri3Q8C460 Gm5874-201ENSMUST00000096101 508 ntBASIC17.98■□□□□ 0.47
Eri3Q8C460 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Eri3Q8C460 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Eri3Q8C460 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.98■□□□□ 0.47
Eri3Q8C460 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Eri3Q8C460 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Eri3Q8C460 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Eri3Q8C460 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Eri3Q8C460 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
Eri3Q8C460 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.96■□□□□ 0.47
Eri3Q8C460 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.96■□□□□ 0.47
Eri3Q8C460 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.96■□□□□ 0.47
Eri3Q8C460 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Eri3Q8C460 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.96■□□□□ 0.46
Eri3Q8C460 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Eri3Q8C460 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Eri3Q8C460 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Eri3Q8C460 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Eri3Q8C460 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.95■□□□□ 0.46
Eri3Q8C460 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms