Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nek11Q8C0Q4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Nek11Q8C0Q4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek11Q8C0Q4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Iqck-206ENSMUST00000208658 2891 ntBASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Gm42642-201ENSMUST00000200683 355 ntBASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nek11Q8C0Q4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nek11Q8C0Q4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nek11Q8C0Q4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Gm13534-201ENSMUST00000121169 513 ntBASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Gm8495-201ENSMUST00000188740 694 ntBASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nek11Q8C0Q4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.51■■□□□ 1.19
Nek11Q8C0Q4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nek11Q8C0Q4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nek11Q8C0Q4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Gm18671-201ENSMUST00000214826 683 ntBASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nek11Q8C0Q4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.47■■□□□ 1.19
Nek11Q8C0Q4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nek11Q8C0Q4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nek11Q8C0Q4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nek11Q8C0Q4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nek11Q8C0Q4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nek11Q8C0Q4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nek11Q8C0Q4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms